6D52
Superoxide dismutase SodCI of Salmonella enterica serovar Typhimurium at 1.6 Angstrom resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-18 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9839 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.530, 68.571, 122.172 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.000 - 1.600 |
R-factor | 0.1603 |
Rwork | 0.160 |
R-free | 0.18400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1eqw |
RMSD bond length | 0.007 |
RMSD bond angle | 0.875 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2992)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.660 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.087 | 0.470 |
Rmeas | 0.090 | 0.517 |
Rpim | 0.025 | 0.209 |
Number of reflections | 73177 | 5783 |
<I/σ(I)> | 17.5 | 2.3 |
Completeness [%] | 96.8 | 77.5 |
Redundancy | 11.7 | 5.9 |
CC(1/2) | 0.999 | 0.894 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 292 | PEG 8000, sodium chloride, sodium acetate |