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6D4L

Joint X-ray/neutron structure of DNA oligonucleotide d(GTGGCCAC)2 with 2'-SeCH3 modification on Cyt5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]293
Detector technologyIMAGE PLATE
Collection date2015-01-22
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54
Spacegroup nameP 43 21 2
Unit cell lengths42.695, 42.695, 24.410
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.000
Rwork0.250
R-free0.31200
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.000
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarenCNS (1.0.0)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.0002.1101.620
High resolution limit [Å]1.5602.0001.560
Rmerge0.0330.2890.417
Number of reflections3414
<I/σ(I)>45.83.52.1
Completeness [%]96.858.176.8
Redundancy6.72.83.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.63030.1 M magnesium acetate, 30% MPD, 0.1 M MES
1VAPOR DIFFUSION, SITTING DROP5.63030.1 M magnesium acetate, 30% MPD, 0.1 M MES

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