6D2X
Crystal structure of the GH26 domain from PbGH26-GH5A endo-beta-mannanase/endo-beta-glucanase from Prevotella bryantii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2017-06-13 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 73.577, 73.577, 105.086 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 27.243 - 1.720 |
R-factor | 0.1547 |
Rwork | 0.153 |
R-free | 0.19560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6d2w |
RMSD bond length | 0.010 |
RMSD bond angle | 0.992 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((dev_3092: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.750 |
High resolution limit [Å] | 1.720 | 1.720 |
Rmerge | 0.082 | 1.142 |
Rpim | 0.035 | 0.492 |
Number of reflections | 35561 | |
<I/σ(I)> | 36.3 | 2.14 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.4 | 6.3 |
CC(1/2) | 0.607 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 2 M ammonium sulfate, 2% (w/v) PEG200, 15 mg/mL protein |