6D0R
Structure of a DNA retention-prone PCNA variant
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-01-25 |
| Detector | RIGAKU SATURN 944 |
| Wavelength(s) | 1.54178 |
| Spacegroup name | P 21 3 |
| Unit cell lengths | 121.716, 121.716, 121.716 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 38.490 - 2.859 |
| R-factor | 0.243790221328 |
| Rwork | 0.242 |
| R-free | 0.27588 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4yhr |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.833 |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-3000 (v703x) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.12-2829) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.900 |
| High resolution limit [Å] | 2.850 | 2.850 |
| Rmerge | 0.145 | 1.072 |
| Rmeas | 0.149 | 1.102 |
| Rpim | 0.033 | 0.256 |
| Number of reflections | 14213 | 707 |
| <I/σ(I)> | 25.99 | 2.35 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 20.8 | 18.8 |
| CC(1/2) | 0.999 | 0.858 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 298 | 50 mM sodium citrate pH 5.3 and 1.7 M (NH4)2SO4 |






