6D0A
Crystal structure of Kynurenine Aminotransferase-II in apo-form, at 1.47 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-08-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 102.765, 102.765, 86.498 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.958 - 1.468 |
R-factor | 0.173889680561 |
Rwork | 0.174 |
R-free | 0.18790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5eun |
RMSD bond length | 0.009 |
RMSD bond angle | 0.999 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX ((1.12-2829:2017)) |
Refinement software | phenix.refine (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.958 | 1.521 |
High resolution limit [Å] | 1.468 | 1.468 |
Rmerge | 0.058 | 0.269 |
Rmeas | 0.060 | 0.275 |
Rpim | 0.012 | 0.053 |
Number of reflections | 79172 | 7700 |
<I/σ(I)> | 41.07 | 11.61 |
Completeness [%] | 99.9 | 98.97 |
Redundancy | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | Protein 10 mg/mL was mixed with an equal volume of a reservoir solution containing 200 mM NaCl, 0.1 M NaCitrate pH 5.6, 24% PEG4K and equilibrated against 1 mL of a reservoir solution. |