6CZE
Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase in complex with inosine triphosphate (ITP) - promiscuous binding mode with disordered nucleoside
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-08-04 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.410, 105.000, 153.980 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.691 - 2.300 |
R-factor | 0.1948 |
Rwork | 0.191 |
R-free | 0.26620 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.026 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 54.410 | 54.410 | 2.380 |
High resolution limit [Å] | 2.300 | 8.910 | 2.300 |
Rmerge | 0.095 | 0.034 | 0.745 |
Rmeas | 0.105 | 0.038 | 0.814 |
Rpim | 0.042 | 0.017 | 0.321 |
Number of reflections | 39891 | 794 | 3853 |
<I/σ(I)> | 12 | ||
Completeness [%] | 99.5 | 99.1 | 99.6 |
Redundancy | 6 | 5.4 | 6.3 |
CC(1/2) | 0.997 | 0.994 | 0.841 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 289.15 | 1.2M - 1.7M ammonium sulfate, 0.1M Tris pH 8 and 10 - 15% glycerol |