Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6CVA

Crystal structure of the N. meningitides methionine-binding protein in its substrate-free conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2017-04-14
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97946
Spacegroup nameP 21 21 2
Unit cell lengths52.564, 89.663, 45.088
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.223 - 1.559
R-factor0.1902
Rwork0.188
R-free0.22010
Structure solution methodSAD
RMSD bond length0.003
RMSD bond angle0.681
Data reduction softwareXDS
Data scaling softwareAimless (0.5.31)
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]34.22334.2231.220
High resolution limit [Å]1.1905.3201.190
Rmerge0.1110.0594.884
Rmeas0.1320.0696.153
Total number of observations425726
Number of reflections12818815127045
<I/σ(I)>4.2317.150.15
Completeness [%]95.697.671
Redundancy3.3213.4382.55
CC(1/2)0.9950.994
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2980.2M MgCl2, 0.1M Bis-Tris pH5.5, 25% PEG3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon