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6CTW

Ternary complex crystal structure of DNA polymerase Beta with a dideoxy terminated primer with CCL2, beta, gamma dCTP analogue

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]100
Detector technologyCCD
Collection date2017-05-07
DetectorRIGAKU SATURN 944
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths50.894, 79.523, 55.495
Unit cell angles90.00, 107.82, 90.00
Refinement procedure
Resolution22.287 - 1.981
R-factor0.1773
Rwork0.174
R-free0.21940
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2fms
RMSD bond length0.007
RMSD bond angle0.995
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.010
High resolution limit [Å]1.9805.3701.980
Rmerge0.0600.0350.349
Rmeas0.0700.0410.436
Rpim0.0360.0210.258
Total number of observations103018
Number of reflections2851914911224
<I/σ(I)>10.5
Completeness [%]97.198.184.5
Redundancy3.63.72.4
CC(1/2)0.9980.825
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29116-18% PEG 3350

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