6CTH
Crystal Structure of Pathogenesis-related Protein 1G (PR-1G) Kinase Domain from Cacao
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-12 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.979100 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 56.798, 56.798, 358.040 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.000 - 1.700 |
R-factor | 0.2098 |
Rwork | 0.208 |
R-free | 0.23846 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3uim |
RMSD bond length | 0.014 |
RMSD bond angle | 1.629 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.081 | 1.730 |
Rmeas | 0.086 | |
Rpim | 0.020 | 0.544 |
Number of reflections | 39498 | 2030 |
<I/σ(I)> | 17.4 | 1.4 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 18.6 | 18.8 |
CC(1/2) | 0.999 | 0.829 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 18% PEG8000, 0.2 M magnesium acetate, 0.1 M SSB buffer |