6CR8
Ternary complex crystal structure of DNA polymerase Beta with a dideoxy terminated primer with CHCL (R & S isomers), beta, gamma dATP analogue
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-28 |
Detector | RIGAKU SATURN 92 |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.585, 78.601, 55.473 |
Unit cell angles | 90.00, 107.14, 90.00 |
Refinement procedure
Resolution | 19.282 - 2.050 |
R-factor | 0.195 |
Rwork | 0.191 |
R-free | 0.24830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fms |
RMSD bond length | 0.008 |
RMSD bond angle | 0.913 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 2.120 |
High resolution limit [Å] | 2.050 | 4.400 | 2.050 |
Rmerge | 0.105 | 0.076 | 0.500 |
Total number of observations | 81827 | ||
Number of reflections | 25685 | 2668 | 2152 |
<I/σ(I)> | 10 | ||
Completeness [%] | 97.3 | 98.8 | 81.6 |
Redundancy | 3.2 | 3.4 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 16-18% PEG 3350 |