6CNH
Human PRPF4B in complex with Rebastinib
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.968610 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 85.169, 75.661, 68.075 |
Unit cell angles | 90.00, 92.82, 90.00 |
Refinement procedure
Resolution | 67.990 - 2.000 |
R-factor | 0.18341 |
Rwork | 0.182 |
R-free | 0.20591 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ijp |
RMSD bond length | 0.008 |
RMSD bond angle | 1.270 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER (2.7.17) |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 67.990 | 2.030 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.070 | 0.535 |
Rmeas | 0.084 | 0.638 |
Rpim | 0.045 | 0.344 |
Number of reflections | 29242 | 2136 |
<I/σ(I)> | 9.7 | 2.4 |
Completeness [%] | 99.5 | 99.5 |
Redundancy | 3.3 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 18% PEG Smear High, 0.1 M N-(2-acetamido)iminodiacetic acid, 0.2 M ammonium sulfate |