6CN0
2.95 Angstrom Crystal Structure of 16S rRNA Methylase from Proteus mirabilis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-10-14 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 61 |
Unit cell lengths | 158.318, 158.318, 122.892 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.980 - 2.950 |
R-factor | 0.22014 |
Rwork | 0.218 |
R-free | 0.26286 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lcu |
RMSD bond length | 0.007 |
RMSD bond angle | 1.298 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.000 |
High resolution limit [Å] | 2.950 | 2.950 |
Rmerge | 0.053 | 0.874 |
Rmeas | 0.060 | 0.986 |
Rpim | 0.027 | 0.446 |
Number of reflections | 36800 | 1815 |
<I/σ(I)> | 25.7 | 2 |
Completeness [%] | 99.9 | 100 |
Redundancy | 4.7 | 4.7 |
CC(1/2) | 0.612 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 292 | Protein: 10.0 mg/ml, 0.3M Sodium chloride, 2mM Magnesium chloride, 0.01M HEPES (pH 7.5), Screen: 2M Ammonium Sulfate, 0.1M Sodium citrate (pH 5.6), 1% Isopropanol, Cryo: paratone |