6CGJ
Structure of the HAD domain of effector protein Lem4 (lpg1101) from Legionella pneumophila
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-05-29 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.9801 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 105.830, 105.830, 31.680 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.329 - 1.750 |
R-factor | 0.16 |
Rwork | 0.158 |
R-free | 0.19790 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELXD |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.329 | 47.329 | 1.800 |
High resolution limit [Å] | 1.750 | 7.830 | 1.750 |
Rmerge | 0.067 | 0.045 | 0.361 |
Rmeas | 0.070 | 0.047 | 0.380 |
Total number of observations | 253049 | ||
Number of reflections | 18738 | 264 | 1306 |
<I/σ(I)> | 25.28 | 46.89 | 5.74 |
Completeness [%] | 99.7 | 99.2 | 96.7 |
Redundancy | 13.505 | 11.125 | 9.784 |
CC(1/2) | 0.999 | 0.998 | 0.974 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.1 M MES 6.5, 0.2 M Magnesium acetate, 18% (w/v) PEG 8000 |