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6CDO

Structure of vaccine-elicited HIV-1 neutralizing antibody vFP16.02 in complex with HIV-1 fusion peptide residue 512-519

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2017-07-23
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1
Spacegroup nameP 41 21 2
Unit cell lengths141.027, 141.027, 77.638
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.954 - 2.099
R-factor0.1956
Rwork0.194
R-free0.22640
RMSD bond length0.008
RMSD bond angle0.972
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.140
High resolution limit [Å]2.1005.7002.100
Rmerge0.1080.0510.931
Rmeas0.1120.0530.978
Rpim0.0300.0140.294
Total number of observations641724
Number of reflections4619725352251
<I/σ(I)>5.7
Completeness [%]100.099.699.7
Redundancy13.913.49.7
CC(1/2)0.9990.858
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1 M NaoAc pH 4.5, 2 M AmSO4

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