6CDC
GID4 in complex with a tetrapeptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-27 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 40.165, 82.531, 54.394 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.400 - 1.750 |
R-factor | 0.1948 |
Rwork | 0.193 |
R-free | 0.23930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | early version of PDB entry 6CCR |
RMSD bond length | 0.014 |
RMSD bond angle | 1.669 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.420 | 45.420 | 1.730 |
High resolution limit [Å] | 1.700 | 9.000 | 1.700 |
Rmerge | 0.072 | 0.027 | 1.265 |
Rmeas | 0.079 | 0.031 | 1.617 |
Rpim | 0.032 | 0.013 | 0.992 |
Total number of observations | 121005 | 894 | 2114 |
Number of reflections | 20397 | 947 | |
<I/σ(I)> | 13.6 | 43.2 | 0.6 |
Completeness [%] | 99.4 | 99.6 | 88.5 |
Redundancy | 5.9 | 4.9 | 2.2 |
CC(1/2) | 0.999 | 0.999 | 0.258 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 30%PEG3350, 0.2M NaCl and 0.1M Tris pH 8.5 |