Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6CD5

Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor XMD17-26

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2015-08-20
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9792
Spacegroup nameP 21 21 21
Unit cell lengths40.120, 42.278, 84.879
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.272 - 1.580
R-factor0.1721
Rwork0.171
R-free0.19310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4wiv
RMSD bond length0.012
RMSD bond angle1.313
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.11.1_2575))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]84.8801.610
High resolution limit [Å]1.5801.580
Rmerge0.0380.634
Rpim0.167
Number of reflections20478991
<I/σ(I)>5.6
Completeness [%]100.0100
Redundancy5.96
CC(1/2)0.9350.623
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION295100mM Sodium Nitrate, 5% Ethylene Glycol, 18% (w/v) PEG3350

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon