Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6CC3

Crystal structure of ykoY-mntP riboswitch chimera bound to cadmium

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]100
Detector technologyCCD
Collection date2016-04-12
DetectorADSC QUANTUM 315
Wavelength(s)0.99
Spacegroup nameC 1 2 1
Unit cell lengths125.531, 68.288, 83.384
Unit cell angles90.00, 97.96, 90.00
Refinement procedure
Resolution46.658 - 2.698
R-factor0.2011
Rwork0.196
R-free0.24850
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4y1i
RMSD bond length0.002
RMSD bond angle0.513
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.12_2829))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.750
High resolution limit [Å]2.6982.698
Rmerge0.1100.802
Number of reflections19403877
<I/σ(I)>15.63
Completeness [%]99.0
Redundancy3.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP294100 mM Magnesium Formate, 15% PEG 3350, 5mM Cadmium Chloride

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon