6C84
Crystal structure of PBP5 from Enterococcus faecium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-25 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9870 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 110.977, 73.071, 131.445 |
Unit cell angles | 90.00, 114.97, 90.00 |
Refinement procedure
Resolution | 29.790 - 2.511 |
R-factor | 0.2251 |
Rwork | 0.224 |
R-free | 0.26500 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.831 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.550 |
High resolution limit [Å] | 2.510 | 6.790 | 2.510 |
Rmerge | 0.096 | 0.040 | 0.829 |
Rmeas | 0.112 | 0.047 | 0.967 |
Rpim | 0.057 | 0.025 | 0.495 |
Total number of observations | 246829 | ||
Number of reflections | 65301 | 3389 | 3220 |
<I/σ(I)> | 10.4 | ||
Completeness [%] | 100.0 | 99.6 | 100 |
Redundancy | 3.8 | 3.5 | 3.8 |
CC(1/2) | 0.997 | 0.749 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 0.2 M Mg acetate, 0.1 M Na cacodylate pH 6.5, 5% PEG 8000 |