6C74
Crystal Structure of Murine CD300lf in complex with phosphocholine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2017-10-29 |
Detector | NOIR-1 |
Wavelength(s) | 1.00004 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 32.640, 40.058, 68.291 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.552 - 1.358 |
R-factor | 0.1675 |
Rwork | 0.165 |
R-free | 0.18940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ffl |
RMSD bond length | 0.010 |
RMSD bond angle | 1.274 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.020 | 40.020 | 1.370 |
High resolution limit [Å] | 1.350 | 7.270 | 1.350 |
Rmerge | 0.132 | 0.066 | 2.086 |
Rmeas | 0.138 | 0.070 | 2.302 |
Rpim | 0.039 | 0.021 | 0.944 |
Number of reflections | 35969 | 171 | 870 |
<I/σ(I)> | 10.6 | ||
Completeness [%] | 98.4 | 99.6 | 86.6 |
Redundancy | 11.8 | 10.9 | 5.6 |
CC(1/2) | 0.998 | 0.984 | 0.421 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.7 | 293 | 0.1 M Phosphocholine, pH 7.4, 33% PEG3350 |