6C27
SAM-III riboswitch ON-state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-06-09 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9795 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 74.011, 96.791, 168.882 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.005 - 3.601 |
R-factor | 0.2117 |
Rwork | 0.210 |
R-free | 0.24320 |
Structure solution method | SAD |
RMSD bond length | 0.001 |
RMSD bond angle | 0.379 |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Phasing software | SOLVE |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.660 |
High resolution limit [Å] | 3.600 | 9.750 | 3.600 |
Rmerge | 0.058 | 0.025 | 0.449 |
Number of reflections | 6980 | 388 | 254 |
<I/σ(I)> | 10.7 | ||
Completeness [%] | 94.5 | 92.2 | 73.8 |
Redundancy | 6.2 | 5.7 | 4.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 20 mM MgCl2, 50 mM sodium cacodylate pH 7.0, 1 mM hexamine cobalt chloride, 2 mM spermine, and 12-16 % (v/v) 2-propanol |