6C1Z
Crystal structure of Apo Caenorhabditis elegans lipid binding protein 8 (LBP-8)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-20 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 46.904, 41.857, 70.896 |
Unit cell angles | 90.00, 91.14, 90.00 |
Refinement procedure
Resolution | 31.227 - 1.300 |
R-factor | 0.1914 |
Rwork | 0.190 |
R-free | 0.21010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3wvm |
RMSD bond length | 0.008 |
RMSD bond angle | 0.897 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (dev_2621) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.350 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmeas | 0.047 | 0.666 |
Rpim | 0.018 | 0.274 |
Number of reflections | 688051 | 4481 |
<I/σ(I)> | 33.3 | 1.55 |
Completeness [%] | 96.3 | 67.9 |
Redundancy | 6.9 | 4.8 |
CC(1/2) | 0.833 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277.15 | 2.81 M ammonium sulfate and 0.25 M potassium formate |