6C17
Crystal Structure of Ketosteroid Isomerase D40N mutant from Pseudomonas Putida (pKSI) bound to 3,4-dinitrophenol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.88556 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 35.881, 94.763, 72.847 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.420 - 1.100 |
R-factor | 0.1482 |
Rwork | 0.147 |
R-free | 0.17410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3fzw |
RMSD bond length | 0.006 |
RMSD bond angle | 0.926 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.25) |
Phasing software | PHASER (2.5.7) |
Refinement software | PHENIX (dev_2376) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 36.420 | 36.420 | 1.120 |
High resolution limit [Å] | 1.100 | 6.030 | 1.100 |
Rmerge | 0.064 | 0.027 | 1.736 |
Rmeas | 0.069 | 0.029 | 1.896 |
Rpim | 0.027 | 0.011 | 0.748 |
Total number of observations | 325459 | ||
Number of reflections | 50704 | 364 | 2433 |
<I/σ(I)> | 12.2 | ||
Completeness [%] | 99.9 | 99.7 | 98.7 |
Redundancy | 6.4 | 6.2 | 6.2 |
CC(1/2) | 0.999 | 0.999 | 0.535 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.2 | 293 | 18-22% PEG 3350, 0.2 M magnesium chloride, 0.04 M potassium phosphate |