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6BX7

Crystal Structure of Human Protocadherin-1 EC1-4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2016-12-18
DetectorADSC QUANTUM 315
Wavelength(s)0.97921
Spacegroup nameP 61 2 2
Unit cell lengths146.981, 146.981, 147.686
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.260 - 2.850
R-factor0.22213
Rwork0.221
R-free0.24336
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5dzv
RMSD bond length0.010
RMSD bond angle1.484
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0230)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.900
High resolution limit [Å]2.8502.850
Rmerge0.1561.627
Rmeas0.1641.710
Rpim0.0500.521
Number of reflections225671103
<I/σ(I)>18.31.92
Completeness [%]100.0100
Redundancy10.710.6
CC(1/2)0.9980.716
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52770.2 M Calcium Chloride, 0.1 M HEPES Sodium Salt pH 7.5, 15% PEG 400 + 15% Glycerol

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