6BVE
Triosephosphate isomerase of Synechocystis in complex with 2-Phosphoglycolic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-002+ |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2016-12-16 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54187 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 72.880, 73.099, 85.175 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.471 - 1.780 |
R-factor | 0.156 |
Rwork | 0.154 |
R-free | 0.19020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1BTM TRUNCATED TO POLY-A |
RMSD bond length | 0.008 |
RMSD bond angle | 0.847 |
Data reduction software | d*TREK |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER (2.7.17) |
Refinement software | PHENIX (1.12-2829-000) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 85.180 | 85.180 | 1.820 |
High resolution limit [Å] | 1.780 | 9.080 | 1.780 |
Rmerge | 0.073 | 0.026 | 0.355 |
Rmeas | 0.078 | 0.028 | 0.393 |
Rpim | 0.027 | 0.010 | 0.165 |
Number of reflections | 44327 | 409 | 2483 |
<I/σ(I)> | 17.6 | ||
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 8.1 | 7.1 | 5.5 |
CC(1/2) | 0.999 | 1.000 | 0.903 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 292 | 0.2 M Calcium acetate hydrate, 0.1 M Sodium cacodylate trihydrate 6.5, 18 % w/v Polyethylene glycol 8,000 |