6BRF
Tubulin-RB3_SLD-TTL in complex with heterocyclic pyrimidine compound 4b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97853 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 105.129, 157.747, 181.596 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.778 - 2.500 |
R-factor | 0.1894 |
Rwork | 0.187 |
R-free | 0.23660 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.791 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.560 |
High resolution limit [Å] | 2.500 | 6.160 | 2.500 |
Rmerge | 0.133 | 0.077 | 0.948 |
Rmeas | 0.144 | 0.084 | 1.031 |
Rpim | 0.055 | 0.033 | 0.403 |
Total number of observations | 710841 | ||
Number of reflections | 104752 | 7373 | 6892 |
<I/σ(I)> | 3.9 | ||
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 6.8 | 6.5 | 6.4 |
CC(1/2) | 0.994 | 0.663 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.7 | 293 | 6% PEG 4000, 5% Glycerol, 0.1 M MES, 30 mM CaCl2, 30 mM MgCl2, pH 6.7 |