6BMN
Structure of human DHHC20 palmitoyltransferase, space group P63
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-C |
| Synchrotron site | APS |
| Beamline | 24-ID-C |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-11-05 |
| Detector | DECTRIS PILATUS 6M-F |
| Wavelength(s) | 0.979100 |
| Spacegroup name | P 63 |
| Unit cell lengths | 99.541, 99.541, 158.386 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 86.205 - 2.250 |
| R-factor | 0.258 |
| Rwork | 0.257 |
| R-free | 0.27790 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.480 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.23) |
| Phasing software | PHASER (2.7.15) |
| Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 86.210 | 86.210 | 2.320 |
| High resolution limit [Å] | 2.250 | 9.000 | 2.250 |
| Rmerge | 0.080 | 0.027 | 4.776 |
| Rmeas | 0.089 | 0.030 | 5.327 |
| Rpim | 0.039 | 0.013 | 2.325 |
| Total number of observations | 216086 | ||
| Number of reflections | 41855 | 659 | 3867 |
| <I/σ(I)> | 12.3 | ||
| Completeness [%] | 99.4 | 97.5 | 99.7 |
| Redundancy | 5.2 | 4.9 | 5.2 |
| CC(1/2) | 0.999 | 0.999 | 0.439 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | LIPIDIC CUBIC PHASE | 293 | 50mM MES, pH5.8, 50mM KH2PO4, 27.7% PEG 300, 25mM DTT, 1.25% 2,5-Hexanediol after 3.5 months. |






