6BKI
Crystal structure of T101A variant mouse cathepsin K at 2.94 Angstrom resolution.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-16 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 41 |
Unit cell lengths | 105.220, 105.220, 41.811 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.056 - 2.940 |
R-factor | 0.1956 |
Rwork | 0.193 |
R-free | 0.23560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4x6h |
RMSD bond length | 0.013 |
RMSD bond angle | 1.172 |
Data reduction software | XDS (20170601) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.060 | 3.050 |
High resolution limit [Å] | 2.940 | 2.940 |
Rmerge | 0.167 | 0.649 |
Number of reflections | 9974 | 2934 |
<I/σ(I)> | 10.05 | 2.69 |
Completeness [%] | 99.0 | 88.8 |
Redundancy | 7.2 | 6.9 |
CC(1/2) | 0.986 | 0.830 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 0.1 M HEPES pH 7.0 30% (w/v) Jeffamine ED-2003 |