6BJM
Human ABO(H) blood group glycosyltransferase GTB R188K mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | RIGAKU |
Temperature [K] | 113 |
Detector technology | IMAGE PLATE |
Collection date | 2006-10-14 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 52.670, 149.670, 79.180 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 74.740 - 1.450 |
R-factor | 0.1897 |
Rwork | 0.189 |
R-free | 0.20360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1lz7 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.465 |
Data reduction software | CrystalClear |
Data scaling software | d*TREK (9.4SSI) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.810 | 19.810 | 1.500 |
High resolution limit [Å] | 1.450 | 3.120 | 1.450 |
Rmerge | 0.031 | 0.017 | 0.283 |
Rmeas | 0.031 | ||
Total number of observations | 208656 | 24572 | 16433 |
Number of reflections | 53903 | 5276 | 5313 |
<I/σ(I)> | 21 | 68.3 | 3.4 |
Completeness [%] | 96.6 | 90.4 | 96.2 |
Redundancy | 3.84 | 4.56 | 3.08 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | GTB/R188K crystals were obtained by hanging drop vapor diffusion at 4 degrees C, where 3 uL of concentrated stock (66-68 mg/mL) was mixed with 1 uL of reservoir solution containing 0.3 M sodium acetate and 0.3 M sodium chloride. |