6BDL
Crystal structure of cGMP-dependent protein kinase Ialpha (PKG Ialpha) catalytic domain in apo state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 77 |
Detector technology | CCD |
Collection date | 2016-11-16 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97741 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 85.114, 50.879, 85.531 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.100 - 1.960 |
R-factor | 0.2092 |
Rwork | 0.209 |
R-free | 0.22170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3fjq |
RMSD bond length | 0.005 |
RMSD bond angle | 0.677 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHENIX (1.12_2829) |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.100 | 2.010 |
High resolution limit [Å] | 1.960 | 1.960 |
Rmerge | 0.076 | 0.613 |
Number of reflections | 52831 | 3706 |
<I/σ(I)> | 9.2 | 1.9 |
Completeness [%] | 99.7 | 99.9 |
Redundancy | 4.7 | 4.7 |
CC(1/2) | 0.998 | 0.841 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 295 | 0.1 M PCTP, pH6.0, 25% w/v PEG1500 |