6BBZ
Room temperature neutron/X-ray structure of sisomicin bound AAC-VIa
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 298 |
Detector technology | IMAGE PLATE |
Collection date | 2017-07-01 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 50.822, 86.169, 76.900 |
Unit cell angles | 90.00, 94.55, 90.00 |
Refinement procedure
Resolution | 15.433 - 2.200 |
R-factor | 0.1987 |
Rwork | 0.198 |
R-free | 0.21990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6bc6 |
RMSD bond length | 0.013 |
RMSD bond angle | 0.810 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11_2567: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.970 |
High resolution limit [Å] | 1.900 | 4.090 | 1.900 |
Rmerge | 0.047 | 0.031 | 0.401 |
Rmeas | 0.067 | 0.038 | 0.511 |
Rpim | 0.047 | 0.023 | 0.313 |
Number of reflections | 25874 | 2624 | 2525 |
<I/σ(I)> | 17.2 | ||
Completeness [%] | 99.3 | 98.6 | 97.2 |
Redundancy | 1.66 | 2.4 | 2.1 |
CC(1/2) | 0.997 | 0.997 | 0.839 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 285 | 0.1 M Tris, pH 8.5, 0.3 M magnesium chloride, 15-17% PEG8000 |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 285 | 0.1 M Tris, pH 8.5, 0.3 M magnesium chloride, 15-17% PEG8000 |