6BA8
YbtT - Type II thioesterase from Yersiniabactin NRPS/PKS biosynthetic pathway
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2017-06-02 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 82.301, 82.301, 81.935 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 58.066 - 1.900 |
R-factor | 0.1941 |
Rwork | 0.192 |
R-free | 0.23120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3qmw |
RMSD bond length | 0.007 |
RMSD bond angle | 0.876 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.200 | 1.940 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.154 | 3.896 |
Rmeas | 0.162 | 4.106 |
Rpim | 0.047 | 1.279 |
Number of reflections | 22829 | 1433 |
<I/σ(I)> | 11.2 | 0.6 |
Completeness [%] | 100.0 | 100 |
Redundancy | 11.8 | 9.9 |
CC(1/2) | 0.997 | 0.344 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 290 | 200 mM tri-sodium citrate, 1% PEG3350, 0.5% n-dodecyl-b-D-maltoside |