6B6Y
Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase, dithionite-reduced then oxygen-exposed (protein batch 2), oxidized C-cluster
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-03 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 |
Unit cell lengths | 65.190, 76.120, 76.110 |
Unit cell angles | 75.84, 64.63, 64.49 |
Refinement procedure
Resolution | 68.582 - 2.600 |
R-factor | 0.1784 |
Rwork | 0.176 |
R-free | 0.22020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6b6v |
RMSD bond length | 0.004 |
RMSD bond angle | 0.856 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 2.660 |
High resolution limit [Å] | 2.600 | 2.600 |
Number of reflections | 34461 | |
<I/σ(I)> | 10.8 | |
Completeness [%] | 94.0 | |
Redundancy | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 150-250 mM magnesium chloride, 16-20% w/v PEG3350 |