6B5I
ALDH1A2 liganded with 1-(4-cyanophenyl)-N-(3-fluorophenyl)-3-[4-(methylsulfonyl)phenyl]-1H-pyrazole-4-carboxamide (compound CM121)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-08-18 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 84.830, 139.470, 163.070 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 81.535 - 2.600 |
R-factor | 0.2228 |
Rwork | 0.222 |
R-free | 0.27730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6alj |
RMSD bond length | 0.004 |
RMSD bond angle | 0.608 |
Data scaling software | XSCALE |
Refinement software | PHENIX (1.11.1-2575_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 81.535 | 81.535 | 2.700 |
High resolution limit [Å] | 2.600 | 20.000 | 2.600 |
Rmerge | 0.123 | 0.046 | 0.669 |
Rmeas | 0.133 | 0.052 | 0.719 |
Total number of observations | 440966 | ||
Number of reflections | 59848 | 154 | 6298 |
<I/σ(I)> | 14.62 | 24.54 | 5.07 |
Completeness [%] | 99.3 | 91.1 | 99.2 |
Redundancy | 7.368 | 4.539 | 7.444 |
CC(1/2) | 0.998 | 0.998 | 0.932 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 40 mg/mL ALDH1A2, 0.2 M sodium citrate tribasic dehydrate, 25% w/v PEG3350, 1.3 mM CM121, 10% DMSO |