6B3A
AprA Methyltransferase 1 - GNAT didomain in complex with Mn2+ and SAM
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.033 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.519, 87.050, 135.961 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.671 - 1.784 |
R-factor | 0.1816 |
Rwork | 0.180 |
R-free | 0.22590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6b39 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.858 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.7.18) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.671 | 46.671 | 1.890 |
High resolution limit [Å] | 1.780 | 5.320 | 1.780 |
Rmerge | 0.071 | 0.032 | 0.791 |
Rmeas | 0.083 | 0.037 | 0.942 |
Total number of observations | 227187 | ||
Number of reflections | 65840 | 2461 | 10533 |
<I/σ(I)> | 10.72 | 32.02 | 1.36 |
Completeness [%] | 95.3 | 87.1 | 95.3 |
Redundancy | 3.451 | 3.679 | 3.278 |
CC(1/2) | 0.998 | 0.999 | 0.723 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 0.15 M DL-malic acid, pH 7, 20% PEG3350 |