6B2H
P38A/T216I mutant of the HIV-1 capsid protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.033190 |
Spacegroup name | P 6 |
Unit cell lengths | 92.242, 92.242, 57.735 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.800 - 2.600 |
R-factor | 0.2029 |
Rwork | 0.200 |
R-free | 0.24100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xfx |
RMSD bond length | 0.009 |
RMSD bond angle | 1.266 |
Data reduction software | Aimless (0.5.31) |
Data scaling software | Aimless (0.5.31) |
Phasing software | PHASER (2.7.17) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.800 | 46.790 | 2.710 |
High resolution limit [Å] | 2.600 | 8.990 | 2.600 |
Rmerge | 0.071 | 0.049 | 0.804 |
Rmeas | 0.075 | 0.053 | 0.850 |
Rpim | 0.024 | 0.018 | 0.273 |
Number of reflections | 8764 | 230 | 1037 |
<I/σ(I)> | 15.8 | ||
Completeness [%] | 99.8 | 99.3 | 98.4 |
Redundancy | 9.8 | 9 | 9.3 |
CC(1/2) | 0.998 | 0.997 | 0.791 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | PEG3350, NaI, Sodium cacodylate, Glycerol |