6B2E
Structure of full length human AMPK (a2b2g1) in complex with a small molecule activator SC4.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-07-21 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 113.936, 118.848, 138.096 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.150 - 3.800 |
R-factor | 0.246 |
Rwork | 0.244 |
R-free | 0.27700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6BIU 4rer |
RMSD bond length | 0.008 |
RMSD bond angle | 1.010 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.150 | 4.250 |
High resolution limit [Å] | 3.800 | 3.800 |
Rmerge | 0.202 | 0.868 |
Rpim | 0.082 | 0.447 |
Number of reflections | 17814 | 4750 |
<I/σ(I)> | 8 | 2.4 |
Completeness [%] | 94.0 | 89.6 |
Redundancy | 6.4 | |
CC(1/2) | 0.986 | 0.659 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 277 | 6-8% PEG 3350, 0.1 M MgCl2, 0.001% cocamidopropyl betaine and 0.1 M imidazole |