6B1X
Crystal structure KPC-2 beta-lactamase complexed with WCK 5153 by soaking
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.12708 |
Spacegroup name | P 1 |
Unit cell lengths | 34.493, 37.436, 82.235 |
Unit cell angles | 92.30, 90.21, 95.08 |
Refinement procedure
Resolution | 34.460 - 1.450 |
R-factor | 0.1467 |
Rwork | 0.145 |
R-free | 0.16870 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 2.352 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.8) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.260 | 1.480 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.030 | 0.187 |
Rmeas | 0.042 | 0.264 |
Rpim | 0.030 | 0.187 |
Total number of observations | 132820 | |
Number of reflections | 67132 | 2315 |
<I/σ(I)> | 15.2 | |
Completeness [%] | 92.6 | 64.7 |
Redundancy | 2 | 1.9 |
CC(1/2) | 0.998 | 0.903 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 295 | of 20% PEG 6000, 100 mM citrate pH 4.0, 100 mM KSCN, 10 mM CdCl2, and 10mM WCK 5153. |