6B0N
Crystal structure of the cleavage-independent prefusion HIV Env glycoprotein trimer of the clade A BG505 isolate (NFL construct) in complex with Fabs PGT122 and PGV19 at 3.39 A
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 23-ID-D |
| Synchrotron site | APS |
| Beamline | 23-ID-D |
| Temperature [K] | 293 |
| Detector technology | PIXEL |
| Collection date | 2015-10-18 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.03321 |
| Spacegroup name | P 63 |
| Unit cell lengths | 161.247, 161.247, 245.651 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 48.854 - 3.400 |
| R-factor | 0.3358 |
| Rwork | 0.335 |
| R-free | 0.34640 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4tvp |
| RMSD bond length | 0.014 |
| RMSD bond angle | 1.726 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.12_2829: 000)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 3.510 |
| High resolution limit [Å] | 3.390 | 3.390 |
| Rpim | 0.145 | 0.559 |
| Number of reflections | 49063 | 4971 |
| <I/σ(I)> | 6.9 | 1.3 |
| Completeness [%] | 98.7 | 99.9 |
| Redundancy | 6.4 | 6.1 |
| CC(1/2) | 0.715 | 0.202 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1M HEPES (pH 7.0), 15% (w/v) PEG4000, and cryo-protected with 25% glycerol |






