6AY0
Crystal structure of H108A peptidylglycine alpha-hydroxylating monooxygenase (PHM) soaked with peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E DW |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-12-02 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.808, 66.532, 70.217 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.300 - 2.600 |
R-factor | 0.1953 |
Rwork | 0.192 |
R-free | 0.26580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1phm |
RMSD bond length | 0.014 |
RMSD bond angle | 1.812 |
Data scaling software | SCALEPACK |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.063 | 0.051 | 0.129 |
Rmeas | 0.069 | 0.057 | 0.142 |
Rpim | 0.028 | 0.025 | 0.057 |
Total number of observations | 58408 | ||
Number of reflections | 9437 | 559 | 349 |
<I/σ(I)> | 19.9 | ||
Completeness [%] | 94.5 | 97.6 | 69 |
Redundancy | 6.2 | 5 | 5.5 |
CC(1/2) | 0.996 | 0.988 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8.5 | 293 | 19-24% PEG 4000, Tris HCL |