6AVV
Crystal structure of Arabidopsis thaliana SOBER1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-28 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.760, 52.290, 74.230 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.436 - 1.510 |
R-factor | 0.17001982761 |
Rwork | 0.169 |
R-free | 0.19620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fj2 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.858 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.12_2829)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.440 | 1.564 |
High resolution limit [Å] | 1.510 | 1.510 |
Rmerge | 0.082 | 0.759 |
Rpim | 0.023 | 0.232 |
Number of reflections | 28632 | 2802 |
<I/σ(I)> | 21.74 | 4.58 |
Completeness [%] | 99.9 | 99.96 |
Redundancy | 13.5 | 11.6 |
CC(1/2) | 0.999 | 0.922 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 0.1 M MES pH 6.5, 16% (v/v) PEG 20,000 |