6AT8
1.1 Angstrom Resolution Structure of Human Cellular Retinol-Binding Protein IV
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2017-08-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97919 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 34.820, 57.334, 68.115 |
Unit cell angles | 90.00, 103.09, 90.00 |
Refinement procedure
Resolution | 29.190 - 1.105 |
R-factor | 0.1267 |
Rwork | 0.126 |
R-free | 0.14920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1lpj |
RMSD bond length | 0.007 |
RMSD bond angle | 0.971 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.190 | 1.160 |
High resolution limit [Å] | 1.105 | 1.105 |
Rmerge | 0.053 | |
Rmeas | 0.035 | 0.090 |
Rpim | 0.026 | 0.077 |
Number of reflections | 49226 | 5474 |
<I/σ(I)> | 31.8 | 8.6 |
Completeness [%] | 94.4 | 72 |
Redundancy | 5.5 | |
CC(1/2) | 0.994 | 0.982 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 295 | 0.2 M NaCl, 0.1 M Bis-Tris/HCl, 25% PEG3350 (w/v) |