Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6APF

Trans-acting transferase from Disorazole synthase complexed with Citrate.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2013-06-27
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9795
Spacegroup nameP 43 21 2
Unit cell lengths104.260, 104.260, 138.690
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.170 - 1.630
R-factor0.1687
Rwork0.168
R-free0.19140
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Native enzyme PDB code: 3RGI
RMSD bond length0.009
RMSD bond angle1.474
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]39.17039.1701.670
High resolution limit [Å]1.6307.2901.630
Rmerge0.0670.0190.982
Rmeas0.0730.0211.078
Total number of observations615784
Number of reflections9531912036965
<I/σ(I)>18.9162.62.07
Completeness [%]99.897.999.9
Redundancy6.466.3265.99
CC(1/2)0.9991.0000.698
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.52981.6M Ammonium Sulfate, 100 mM sodium citrate (pH 4.5)

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon