6ANG
Crystal structure of PPK2 Class III in the complex with AMP from Cytophaga hutchinsonii ATCC 33406
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-01-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9794 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 111.224, 111.224, 177.694 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.320 - 2.450 |
R-factor | 0.19115 |
Rwork | 0.190 |
R-free | 0.22018 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rhf |
RMSD bond length | 0.020 |
RMSD bond angle | 1.707 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.490 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.120 | |
Number of reflections | 20573 | |
<I/σ(I)> | 12 | |
Completeness [%] | 98.5 | |
Redundancy | 5.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 293 | 0.8 Ammonium Sulfate 0.1M NaCL 0.1 M Sodium Citrate:HCl pH 4 |