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6AMY

Crystal structure of a 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase from Acinetobacter baumannii

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2015-02-21
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 21 21 21
Unit cell lengths64.360, 83.210, 148.040
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.946 - 2.850
R-factor0.1813
Rwork0.177
R-free0.25500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3gos
RMSD bond length0.008
RMSD bond angle1.007
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]41.94641.9462.920
High resolution limit [Å]2.85012.7502.850
Rmerge0.0600.0270.526
Rmeas0.0650.0290.561
Total number of observations156216
Number of reflections192632511423
<I/σ(I)>24.3452.863.97
Completeness [%]99.993.3100
Redundancy8.116.1838.318
CC(1/2)0.9990.9990.904
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5289AcbaC.00002.a.B1.PS02398 at 23.06 mg/mL against MCSG1 condition C12 0.1 M BisTris pH 6.5, 25% PEG 3350, crystal tracking ID 263652c12, unique puck ID tvb4-5

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PDB entries from 2024-10-09

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