6AJD
Crystal structure of a monometallic dihydropyrimidinase from Pseudomonas aeruginosa PAO1 reveals no lysine carbamylation within the active site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13C1 |
Synchrotron site | NSRRC |
Beamline | BL13C1 |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2017-07-11 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.975 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 88.375, 110.169, 112.660 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.277 - 2.223 |
R-factor | 0.1844 |
Rwork | 0.182 |
R-free | 0.23230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5e5c |
RMSD bond length | 0.008 |
RMSD bond angle | 0.980 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.310 |
High resolution limit [Å] | 2.223 | 2.223 |
Rmerge | 0.133 | 0.491 |
Number of reflections | 54478 | 5383 |
<I/σ(I)> | 3.9 | 12.9 |
Completeness [%] | 99.8 | 99.9 |
Redundancy | 5.1 | 5.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 25%PEG4000, 100mM Tris-HCl pH8.5, 200mM Calcium Chloride |