6ADW
Crystal structure of the Zika virus NS3 helicase (apo form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9791 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.532, 68.534, 56.883 |
Unit cell angles | 90.00, 92.40, 90.00 |
Refinement procedure
Resolution | 43.748 - 2.200 |
R-factor | 0.1702 |
Rwork | 0.168 |
R-free | 0.21560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vbc |
RMSD bond length | 0.007 |
RMSD bond angle | 0.936 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.280 |
High resolution limit [Å] | 2.200 | 4.740 | 2.200 |
Rmerge | 0.097 | 0.056 | 0.419 |
Rmeas | 0.114 | 0.066 | 0.492 |
Rpim | 0.059 | 0.034 | 0.256 |
Number of reflections | 21028 | 2160 | 2106 |
<I/σ(I)> | 7.8 | ||
Completeness [%] | 99.8 | 99.9 | 99.8 |
Redundancy | 3.6 | 3.6 | 3.6 |
CC(1/2) | 0.993 | 0.876 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 289 | PEG3350, lithium sulfate |