6AC5
Crystal structure of RIPK1 death domain GlcNAcylated by EPEC effector NleB
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U |
| Synchrotron site | SSRF |
| Beamline | BL17U |
| Temperature [K] | 93 |
| Detector technology | CCD |
| Collection date | 2014-05-30 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97928 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 55.750, 55.750, 59.150 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 26.126 - 1.451 |
| R-factor | 0.1574 |
| Rwork | 0.156 |
| R-free | 0.18940 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6aci |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.057 |
| Data reduction software | iMOSFLM |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 32.800 | 1.530 |
| High resolution limit [Å] | 1.450 | 1.450 |
| Rmerge | 0.077 | 0.265 |
| Number of reflections | 17069 | 2421 |
| <I/σ(I)> | 21.4 | 7.9 |
| Completeness [%] | 99.9 | 100 |
| Redundancy | 13.2 | 11.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 2.2 M ammonium sulfate, 100 mM Bis-Tris pH 5.5 |






