6A9B
T4 dCMP hydroxymethylase structure solved by I-SAD using a home source
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2014-03-14 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.5418 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 52.603, 74.982, 155.345 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 26.301 - 2.010 |
| R-factor | 0.1632 |
| Rwork | 0.160 |
| R-free | 0.19150 |
| Structure solution method | SAD |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | SOLVE |
| Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.040 |
| High resolution limit [Å] | 2.010 | 5.450 | 2.010 |
| Rmerge | 0.059 | 0.045 | 0.208 |
| Rmeas | 0.064 | 0.049 | 0.225 |
| Rpim | 0.024 | 0.019 | 0.085 |
| Total number of observations | 145060 | ||
| Number of reflections | 20840 | 1132 | 1026 |
| <I/σ(I)> | 27.3 | ||
| Completeness [%] | 99.8 | 98.4 | 100 |
| Redundancy | 7 | 6.5 | 6.8 |
| CC(1/2) | 0.999 | 0.979 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 0.1 M Tris-HCl pH 8.5 0.96 M sodium citrate |






