6A4R
Crystal structure of aspartate bound peptidase E from Salmonella enterica
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
| Synchrotron site | RRCAT INDUS-2 |
| Beamline | PX-BL21 |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2018-06-05 |
| Detector | MAR scanner 345 mm plate |
| Wavelength(s) | 0.97949 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 67.155, 42.889, 89.290 |
| Unit cell angles | 90.00, 107.02, 90.00 |
Refinement procedure
| Resolution | 41.605 - 1.828 |
| R-factor | 0.1902 |
| Rwork | 0.189 |
| R-free | 0.21260 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1fy2 |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.643 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 45.340 | 1.870 |
| High resolution limit [Å] | 1.827 | 1.830 |
| Rmerge | 0.057 | 0.470 |
| Rmeas | 0.070 | 0.601 |
| Rpim | 0.041 | 0.369 |
| Number of reflections | 41754 | 2142 |
| <I/σ(I)> | 13.4 | 1.9 |
| Completeness [%] | 96.2 | 79.5 |
| Redundancy | 2.9 | 2.3 |
| CC(1/2) | 0.997 | 0.740 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | MICROBATCH | 5.5 | 294 | 0.1 M Bis-tris pH 5.5, 0.2 M Sodium chloride, 31 % Peg 3350 |






