6A3G
Levoglucosan dehydrogenase, complex with NADH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-12-20 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 80.742, 93.787, 100.989 |
Unit cell angles | 90.00, 100.97, 90.00 |
Refinement procedure
Resolution | 36.530 - 1.900 |
R-factor | 0.17046 |
Rwork | 0.169 |
R-free | 0.20448 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4h3v |
RMSD bond length | 0.010 |
RMSD bond angle | 1.423 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.104 | 0.777 |
Number of reflections | 114689 | 5628 |
<I/σ(I)> | 11.4 | 1.4 |
Completeness [%] | 98.7 | 97.2 |
Redundancy | 3.6 | 3.3 |
CC(1/2) | 0.903 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | MES-NaOH, PEG 3000, PEG 200, NADH |